Publications

For the latest information, please view Claude becker's ORCiD link.

Selected Publications

2020

Hüther P, Schandry N, ..., Becker C (2020) araDEEPopsis: From images to phenotypic traits using deep transfer learning. bioRxiv:2020.04.01.018192v1.

2019

Schandry, N., Becker, C.§ (2019) Allelopathic plants – models for studying plant-interkingdom interactions. Trends in Plant Sci, 25: 176-185.

2018

Wibowo, A.*, Becker, C.*, Durr, J., Price, J., Spaepen, S., Hilton, S., Putra, H., Papareddy, R., Saintain, Q., Harvey, S., Bending, G.D., Schulze-Lefert, P., Weigel, D., Gutierrez-Marcos, J. (2018) Partial maintenance of organ-specific epigenetic marks during plant asexual reproduction leads to heritable phenotypic variation. PNAS, 115: E9145-9152. https://doi.org/10.1073/pnas.1805371115

Exposito-Alonso, M.*, Becker, C.*, Schuenemann, V.J., Reitter, E., Setzer, C., Slovak, R., Brachi, B., Hagmann, J., Grimm, D.G., Jiahui, C., Busch, W., Bergelson, J., Ness, R.W., Krause, J., Burbano, H.A., Weigel, D. (2018) The rate and potential relevance of new mutations in a colonizing plant lineage, PLoS Genet, 14(2): e1007155. https://doi.org/10.1371/journal.pgen.1007155

2016

Wibowo, A.*, Becker, C.*, Marconi, G., Durr, J., Price, J., Hagmann, J., Papareddy, R., Putra, H., Kageyama, J., Becker, J., Weigel, D., and Gutierrez-Marcos, J. (2016). Hyperosmotic stress memory in Arabidopsis is mediated by distinct epigenetically labile sites in the genome and is restricted in the male germline by DNA glycosylase activity. Elife 5: e13546. http://dx.doi.org/10.7554/eLife.13546

1001 Genomes Consortium (2016). 1,135 Genomes reveal the global pattern of polymorphism in Arabidopsis thaliana. Cell 166, 481-491. http://dx.doi.org/10.1016/j.cell.2016.05.063

Kawakatsu, T., Huang, S.S., Jupe, F., Sasaki, E., Schmitz, R.J., Urich, M.A., Castanon, R., Nery, J.R., Barragan, C., He, Y., Chen, H., Dubin, M., Lee, C.R., Wang, C., Bemm, F., Becker, C., O'Neil, R., O'Malley, R.C., Quarless, D.X., Genomes, C., Schork, N.J., Weigel, D., Nordborg, M., and Ecker, J.R. (2016). Epigenomic diversity in a global collection of Arabidopsis thaliana accessions. Cell 166, 492-505. http://dx.doi.org/10.1016/j.cell.2016.06.044

2015

Venturelli, S., Belz, R.G., Kamper, A., Berger, A., von Horn, K., Wegner, A., Bocker, A., Zabulon, G., Langenecker, T., Kohlbacher, O., Barneche, F., Weigel, D., Lauer, U.M., Bitzer, M., and Becker, C.§ (2015). Plants release precursors of histone deacetylase inhibitors to suppress growth of competitors. Plant Cell 27, 3175-3189. http://dx.doi.org/10.1105/tpc.15.00585

Hagmann, J*., Becker, C.*, Muller, J., Stegle, O., Meyer, R.C., Wang, G., Schneeberger, K., Fitz, J., Altmann, T., Bergelson, J., Borgwardt, K., and Weigel, D. (2015). Century-scale methylome stability in a recently diverged Arabidopsis thaliana lineage. PLoS Genet 11, e1004920. http://dx.doi.org/10.1371/journal.pgen.1004920

2011

Becker, C.*, Hagmann, J.*, Muller, J., Koenig, D., Stegle, O., Borgwardt, K., and Weigel, D. (2011). Spontaneous epigenetic variation in the Arabidopsis thaliana methylome. Nature 480, 245-249. http://dx.doi.org/10.1038/nature10555